dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000919_5|CGC1
Gene ID: MGYG000000919_01365
Location and strand information: 52519 - 53172 (-)
Family: 2.A.115.2.12
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000919_5|CGC1
Gene ID: MGYG000000919_01366
Location and strand information: 53239 - 55521 (-)
Family: GH146
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.081
Protein molecular weight: 87720.98
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000919_5|CGC1
Gene ID: MGYG000000919_01367
Location and strand information: 55806 - 56828 (-)
Family: 3.A.1.2.14
Protein type: TC
Protein description: Inner membrane ABC transporter permease protein YjfF

Gene clsuter ID: MGYG000000919_5|CGC1
Gene ID: MGYG000000919_01368
Location and strand information: 56825 - 57880 (-)
Family: 3.A.1.2.25
Protein type: TC
Protein description: Inner membrane ABC transporter permease protein YtfT

Gene clsuter ID: MGYG000000919_5|CGC1
Gene ID: MGYG000000919_01369
Location and strand information: 57873 - 59402 (-)
Family: 3.A.1.2.25
Protein type: TC
Protein description: Fructose import ATP-binding protein FruK

Gene clsuter ID: MGYG000000919_5|CGC1
Gene ID: MGYG000000919_01370
Location and strand information: 59491 - 60579 (-)
Family: 3.A.1.2.14
Protein type: TC
Protein description: ABC transporter periplasmic-binding protein YtfQ

Gene clsuter ID: MGYG000000919_5|CGC1
Gene ID: MGYG000000919_01371
Location and strand information: 60742 - 62199 (-)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000919_5|CGC1
Gene ID: MGYG000000919_01372
Location and strand information: 62201 - 63805 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Regulator of RpoS

Gene clsuter ID: MGYG000000919_5|CGC1
Gene ID: MGYG000000919_01373
Location and strand information: 64111 - 64941 (-)
Family: 3.A.1.1.20
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000000919_5|CGC1
Gene ID: MGYG000000919_01374
Location and strand information: 64944 - 65846 (-)
Family: 3.A.1.1.4
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000000919_5|CGC1
Gene ID: MGYG000000919_01375
Location and strand information: 65871 - 67385 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000919_5|CGC1
Gene ID: MGYG000000919_01376
Location and strand information: 67416 - 68369 (-)
Family: GH43|CBM42|GH43_26
Protein type: CAZyme
Protein description: Extracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 4.7101
Protein molecular weight: 37084.03
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000919_5|CGC1
Gene ID: MGYG000000919_01377
Location and strand information: 68417 - 69922 (-)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-L-arabinofuranosidase 2
Protein isoelectric point: 5.6695
Protein molecular weight: 57174.11
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000919_5|CGC1
Gene ID: MGYG000000919_01378
Location and strand information: 69986 - 70240 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000919_5|CGC1
Gene ID: MGYG000000919_01379
Location and strand information: 70688 - 71614 (-)
Family: HTH_5
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000919_5|CGC1
Gene ID: MGYG000000919_01380
Location and strand information: 71711 - 73210 (-)
Family: GH43|GH43_4
Protein type: CAZyme
Protein description: Extracellular endo-alpha-(1->5)-L-arabinanase 2
Protein isoelectric point: 4.7601
Protein molecular weight: 56129.04
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000919_01366	GH146_e5
MGYG000000919_01376	GH43_e158\|CBM42_e13\|3.2.1.-	xylan
MGYG000000919_01377	GH51_e14\|3.2.1.55	arabinan
MGYG000000919_01380	GH43_e2\|3.2.1.99	arabinan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is arabinan

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000919_01365	hypothetical protein	TC	52519	53172	-	2.A.115.2.12
MGYG000000919_01366	hypothetical protein	CAZyme	53239	55521	-	GH146
MGYG000000919_01367	Inner membrane ABC transporter permease protein YjfF	TC	55806	56828	-	3.A.1.2.14
MGYG000000919_01368	Inner membrane ABC transporter permease protein YtfT	TC	56825	57880	-	3.A.1.2.25
MGYG000000919_01369	Fructose import ATP-binding protein FruK	TC	57873	59402	-	3.A.1.2.25
MGYG000000919_01370	ABC transporter periplasmic-binding protein YtfQ	TC	59491	60579	-	3.A.1.2.14
MGYG000000919_01371	hypothetical protein	TC	60742	62199	-	8.A.59.2.1
MGYG000000919_01372	Regulator of RpoS	TF	62201	63805	-	HTH_AraC+HTH_AraC
MGYG000000919_01373	L-arabinose transport system permease protein AraQ	TC	64111	64941	-	3.A.1.1.20
MGYG000000919_01374	Lactose transport system permease protein LacF	TC	64944	65846	-	3.A.1.1.4
MGYG000000919_01375	hypothetical protein	STP	65871	67385	-	SBP_bac_1
MGYG000000919_01376	Extracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	67416	68369	-	GH43\| CBM42\| GH43_26
MGYG000000919_01377	Intracellular exo-alpha-L-arabinofuranosidase 2	CAZyme	68417	69922	-	GH51
MGYG000000919_01378	hypothetical protein	null	69986	70240	-	DUF6171
MGYG000000919_01379	hypothetical protein	TF	70688	71614	-	HTH_5
MGYG000000919_01380	Extracellular endo-alpha-(1->5)-L-arabinanase 2	CAZyme	71711	73210	-	GH43\| GH43_4
Protein ID	Protein Name	Type	Start	End	Strand	Signature